2024-11-22 12:55:49,726 WARN [FelixStartLevel] c.a.i.IGB [IGB.java:491] Trying to add set keystroke for action com.affymetrix.igb.action.HomeAction. But action class com.affymetrix.igb.action.HomeAction exists with same keystroke "ctrl pressed H". Using keystroke with latest action. 2024-11-22 12:55:49,826 INFO [AWT-EventQueue-0] o.l.i.q.QuickloadDataProvider [QuickloadDataProvider.java:112] Initializing Quickload Server http://lorainelab-quickload.scidas.org/blueberry/ 2024-11-22 12:55:49,954 WARN [AWT-EventQueue-0] o.l.i.q.u.QuickloadUtils [QuickloadUtils.java:55] Optional quickload synonyms.txt file could not be loaded from http://lorainelab-quickload.scidas.org/blueberry/synonyms.txt 2024-11-22 12:55:50,020 WARN [AWT-EventQueue-0] o.l.i.q.u.QuickloadUtils [QuickloadUtils.java:76] Optional species.txt could not be loaded from: http://lorainelab-quickload.scidas.org/blueberry/species.txt 2024-11-22 12:55:50,030 INFO [AWT-EventQueue-0] o.l.i.u.r.a.s.UCSCRestApiDataProvider [UCSCRestApiDataProvider.java:105] Initializing UCSC Rest Server https://api.genome.ucsc.edu/ 2024-11-22 12:55:50,416 INFO [FelixStartLevel] o.l.i.a.IgbAppServerLauncher [IgbAppServerLauncher.java:52] setPlugingManagerService START 2024-11-22 12:55:50,419 INFO [FelixStartLevel] o.l.i.a.IgbAppServerLauncher [IgbAppServerLauncher.java:54] setPluginManagerService DONE 2024-11-22 12:55:50,421 INFO [FelixStartLevel] o.l.i.a.IgbAppServerLauncher [IgbAppServerLauncher.java:65] activate START 2024-11-22 12:55:50,421 INFO [FelixStartLevel] o.l.i.a.IgbAppServerLauncher [IgbAppServerLauncher.java:66] org.lorainelab.igb.plugin.manager.service.impl.PluginManagerServiceImpl@2af5e328 2024-11-22 12:55:50,423 INFO [FelixStartLevel] o.l.i.a.IgbAppServerLauncher [IgbAppServerLauncher.java:68] activate DONE 2024-11-22 12:55:50,598 INFO [FelixStartLevel] c.a.i.b.a.BookmarkActionManager [BookmarkActionManager.java:91] Loading bookmarks from file C:\Users\srira\AppData\Roaming\IGB\bookmarks.html 2024-11-22 12:55:50,604 INFO [FelixStartLevel] c.a.i.b.a.BookmarkActionManager [BookmarkActionManager.java:131] Saving bookmarks to file C:\Users\srira\AppData\Roaming\IGB\bookmarks.html~ 2024-11-22 12:55:50,760 INFO [FelixStartLevel] c.a.i.Activator [Activator.java:139] IGB Started 2024-11-22 12:55:56,712 INFO [Thread-23] o.l.i.a.IgbAppServerLauncher [IgbAppServerLauncher.java:90] Started REST endpoint. 2024-11-22 12:56:13,910 INFO [pool-7-thread-1] c.a.i.v.l.GeneralLoadUtils [GeneralLoadUtils.java:563] Loaded Araport in 536.2 ms 2024-11-22 12:56:42,928 INFO [SwingWorker-pool-9-thread-1] c.a.i.IGB [IGB.java:559] Completed loading sequence for Chr1 : 2,257,233 - 2,260,337 from IGB Quickload http://igbquickload-main.bioviz.org/quickload/ 2024-11-22 12:57:54,851 INFO [AWT-EventQueue-0] o.l.i.p.ProtAnnotService [ProtAnnotService.java:178] All jobs cancelled 2024-11-22 13:00:28,996 INFO [SwingWorker-pool-9-thread-2] c.a.i.v.l.GeneralLoadUtils [GeneralLoadUtils.java:912] All residues in range are already loaded on sequence Chr1 2024-11-22 13:00:40,233 INFO [pool-10-thread-1] o.l.i.p.i.InterProscanServiceRest [InterProscanServiceRest.java:165] iprscan5-R20241122-180037-0527-17153641-p1m 2024-11-22 13:00:42,766 INFO [pool-10-thread-1] o.l.i.p.i.InterProscanServiceRest [InterProscanServiceRest.java:165] iprscan5-R20241122-180039-0987-91882917-p1m 2024-11-22 13:00:44,195 INFO [Timer-2] o.l.i.p.ProtAnnotService [ProtAnnotService.java:694] iprscan5-R20241122-180037-0527-17153641-p1m Running 2024-11-22 13:00:45,636 INFO [Timer-2] o.l.i.p.ProtAnnotService [ProtAnnotService.java:694] iprscan5-R20241122-180039-0987-91882917-p1m Running 2024-11-22 13:00:47,067 INFO [Timer-2] o.l.i.p.ProtAnnotService [ProtAnnotService.java:694] iprscan5-R20241122-180037-0527-17153641-p1m Running 2024-11-22 13:00:48,503 INFO [Timer-2] o.l.i.p.ProtAnnotService [ProtAnnotService.java:694] iprscan5-R20241122-180039-0987-91882917-p1m Running 2024-11-22 13:00:49,936 INFO [Timer-2] o.l.i.p.ProtAnnotService [ProtAnnotService.java:694] iprscan5-R20241122-180037-0527-17153641-p1m Running 2024-11-22 13:00:51,323 INFO [Timer-2] o.l.i.p.ProtAnnotService [ProtAnnotService.java:694] iprscan5-R20241122-180039-0987-91882917-p1m Running 2024-11-22 13:00:52,741 INFO [Timer-2] o.l.i.p.ProtAnnotService [ProtAnnotService.java:694] iprscan5-R20241122-180037-0527-17153641-p1m Running 2024-11-22 13:00:54,236 INFO [Timer-2] o.l.i.p.ProtAnnotService [ProtAnnotService.java:694] iprscan5-R20241122-180039-0987-91882917-p1m Running 2024-11-22 13:00:55,680 INFO [Timer-2] o.l.i.p.ProtAnnotService [ProtAnnotService.java:694] iprscan5-R20241122-180037-0527-17153641-p1m Running 2024-11-22 13:00:57,206 INFO [Timer-2] o.l.i.p.ProtAnnotService [ProtAnnotService.java:694] iprscan5-R20241122-180039-0987-91882917-p1m Running 2024-11-22 13:00:58,639 INFO [Timer-2] o.l.i.p.ProtAnnotService [ProtAnnotService.java:694] iprscan5-R20241122-180037-0527-17153641-p1m Running 2024-11-22 13:01:00,279 INFO [Timer-2] o.l.i.p.ProtAnnotService [ProtAnnotService.java:694] iprscan5-R20241122-180039-0987-91882917-p1m Running 2024-11-22 13:01:01,915 INFO [Timer-2] o.l.i.p.ProtAnnotService [ProtAnnotService.java:694] iprscan5-R20241122-180037-0527-17153641-p1m Running 2024-11-22 13:01:03,317 INFO [Timer-2] o.l.i.p.ProtAnnotService [ProtAnnotService.java:694] iprscan5-R20241122-180039-0987-91882917-p1m Running 2024-11-22 13:01:04,785 INFO [Timer-2] o.l.i.p.ProtAnnotService [ProtAnnotService.java:694] iprscan5-R20241122-180037-0527-17153641-p1m Running 2024-11-22 13:01:06,211 INFO [Timer-2] o.l.i.p.ProtAnnotService [ProtAnnotService.java:694] iprscan5-R20241122-180039-0987-91882917-p1m Running 2024-11-22 13:01:07,650 INFO [Timer-2] o.l.i.p.ProtAnnotService [ProtAnnotService.java:694] iprscan5-R20241122-180037-0527-17153641-p1m Running 2024-11-22 13:01:09,087 INFO [Timer-2] o.l.i.p.ProtAnnotService [ProtAnnotService.java:694] iprscan5-R20241122-180039-0987-91882917-p1m Running 2024-11-22 13:01:10,517 INFO [Timer-2] o.l.i.p.ProtAnnotService [ProtAnnotService.java:694] iprscan5-R20241122-180037-0527-17153641-p1m Running 2024-11-22 13:01:11,953 INFO [Timer-2] o.l.i.p.ProtAnnotService [ProtAnnotService.java:694] iprscan5-R20241122-180039-0987-91882917-p1m Running 2024-11-22 13:01:13,384 INFO [Timer-2] o.l.i.p.ProtAnnotService [ProtAnnotService.java:694] iprscan5-R20241122-180037-0527-17153641-p1m Finished 2024-11-22 13:01:14,776 INFO [Timer-2] o.l.i.p.ProtAnnotService [ProtAnnotService.java:694] iprscan5-R20241122-180039-0987-91882917-p1m Finished 2024-11-22 13:01:36,661 ERROR [pool-10-thread-1] o.l.i.p.i.InterProscanServiceRest [InterProscanServiceRest.java:180] Server returned HTTP response code: 400 for URL: http://www.ebi.ac.uk/Tools/services/rest/iprscan5/run java.io.IOException: Server returned HTTP response code: 400 for URL: http://www.ebi.ac.uk/Tools/services/rest/iprscan5/run at java.base/sun.net.www.protocol.http.HttpURLConnection.getInputStream0(HttpURLConnection.java:2011) at java.base/sun.net.www.protocol.http.HttpURLConnection.getInputStream(HttpURLConnection.java:1602) at org.lorainelab.igb.protannot.interproscan.InterProscanServiceRest.readResponseFromPost(InterProscanServiceRest.java:163) at org.lorainelab.igb.protannot.interproscan.InterProscanServiceRest.run(InterProscanServiceRest.java:178) at org.lorainelab.igb.protannot.ProtAnnotService.loadSequence(ProtAnnotService.java:751) at org.lorainelab.igb.protannot.ProtAnnotService$4.runInBackground(ProtAnnotService.java:583) at org.lorainelab.igb.protannot.ProtAnnotService$4.runInBackground(ProtAnnotService.java:579) at com.affymetrix.genometry.thread.CThreadWorker.doInBackground(CThreadWorker.java:73) at java.desktop/javax.swing.SwingWorker$1.call(SwingWorker.java:305) at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:317) at java.desktop/javax.swing.SwingWorker.run(SwingWorker.java:342) at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1144) at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:642) at java.base/java.lang.Thread.run(Thread.java:1583) 2024-11-22 13:01:36,959 ERROR [pool-10-thread-1] o.l.i.p.i.InterProscanServiceRest [InterProscanServiceRest.java:180] Server returned HTTP response code: 400 for URL: http://www.ebi.ac.uk/Tools/services/rest/iprscan5/run java.io.IOException: Server returned HTTP response code: 400 for URL: http://www.ebi.ac.uk/Tools/services/rest/iprscan5/run at java.base/sun.net.www.protocol.http.HttpURLConnection.getInputStream0(HttpURLConnection.java:2011) at java.base/sun.net.www.protocol.http.HttpURLConnection.getInputStream(HttpURLConnection.java:1602) at org.lorainelab.igb.protannot.interproscan.InterProscanServiceRest.readResponseFromPost(InterProscanServiceRest.java:163) at org.lorainelab.igb.protannot.interproscan.InterProscanServiceRest.run(InterProscanServiceRest.java:178) at org.lorainelab.igb.protannot.ProtAnnotService.loadSequence(ProtAnnotService.java:751) at org.lorainelab.igb.protannot.ProtAnnotService$4.runInBackground(ProtAnnotService.java:583) at org.lorainelab.igb.protannot.ProtAnnotService$4.runInBackground(ProtAnnotService.java:579) at com.affymetrix.genometry.thread.CThreadWorker.doInBackground(CThreadWorker.java:73) at java.desktop/javax.swing.SwingWorker$1.call(SwingWorker.java:305) at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:317) at java.desktop/javax.swing.SwingWorker.run(SwingWorker.java:342) at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1144) at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:642) at java.base/java.lang.Thread.run(Thread.java:1583) 2024-11-22 13:01:43,251 INFO [AWT-EventQueue-0] o.l.i.p.ProtAnnotService [ProtAnnotService.java:178] All jobs cancelled